tRNA/fragment and flanking sequence:

tRNA
1688230 actaaccctc aagtctgagt aatattaact tttgctgttt gaaacagccg aCGCGGGGTG
1688290 GAGCAGCTCG GTAGCTCGCT GGGCTCATAA CCCAGAGGTC CATGGTTCAA ATCCATGCCC
1688350 CGCTACTAat caaagcctag aaatcgtgcg gtttctaggc tttttatttt cttcttgcc

tDNA Fragment
1695956 ttgtcaagac ctagaataaa caataccaaa ctcggataaa ctgtagaaac gTGGGCTCAT
1696016 AACCCAGAGG TCCATGGTTC AAATCCATGC CCCGCTACca ctgagggcta ggaatcgaat
1696076 tcctagccct tttgcttttc cagcgcatg

tRNA gene (GREEN CAPS): 1688281..1688357
Displaced gene fragment (GREEN, mismatches lowercase): 1696007..1696053
Match (underlined) extends 3-prime beyond tDNA: 0 bp
Index point: nt 36
Mismatches: 0
Damage within repeat (Red): none
Junction: anticodon attachment site
Supplemental Island Information
Island Length: 7698 bp
Mononucleotide (difference to replicon): 1.21
Dinucleotide bias (between genome and island): 0.10
Minimum distance between integrase and endpoint: 2.41
Density of hypothetical proteins (fold over replicon): 0.56
Housekeeping index: -10.27

Potential integrases in NC_017866
13624991363611
16946021695855Integrase in the opposite orientation as tDNA

Potential fragments for tRNA-Met(CAT)
10542351054219
16960531696007


Genes: 9
LeftRightStrandAnnotation
16884471689547-ID=387821318; acc=YP_006301361.1; Name=hypothetical protein W7Y_1438;
16897251689910+ID=387821319; acc=YP_006301362.1; Name=hypothetical protein W7Y_1439;
16900171690412+ID=387821320; acc=YP_006301363.1; Name=hypothetical protein W7Y_1440;
16904091691170+ID=387821321; acc=YP_006301364.1; Name=cell division protein FtsK;
16911671692084+ID=387821322; acc=YP_006301365.1; Name=hypothetical protein W7Y_1442;
16921731692295+ID=387821323; acc=YP_006301366.1; Name=hypothetical protein W7Y_1443;
16923151693433-ID=387821324; acc=YP_006301367.1; Name=HNH endonuclease;
16934331694545-ID=387821325; acc=YP_006301368.1; Name=Modification methylase EcoRI;
16946021695822-ID=387821326; acc=YP_006301369.1; Name=phage integrase;

Sequence:     

>Bifidobacterium animalis subsp. lactis B420|1688217-1696115|100bp flanks
atccgtgggtaaaacccgcccgaaagtggtaaggcgacacgccggcttgactaaccctcaagtctgagtaatattaacttttgctgtttgaaacagccgaCGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCCATGGTTCAAATCCATGCCCCGCTACTAATCAAAGCCTAGAAATCGTGCGGTTTCTAGGCTTTTTATTTTCTTCTTGCCCTACGCTAGAACGCGGATTTGGACAAATTCTGGACATACTATCGTCCACTCTTGCTCTTCTTGCTCTTTTCCTCGCTATCTGCACGTAACTTTTCATACTGCACTCGCTCTGCCTTAGTAGGACTTGCAAGCCTATCCGGTAGATCATTTACCGCAAGAATTGGCTCGATGTACAGCGAATATTTGTAATGTCGTTCATTTAACCCAAGCACTCTCTCGCATTCTTCCTCAAGCTGCGGCGGTATGGTTATGCCGTCTTCAAGAAGTAGGCGACGGATTCCATATAGATTCGTAACATTTGACTCCAGATAATCGAAAACACTGGAATAGATTTCCGCCGGACTGATACCGTATTCATCCTTTTCCGTAGACAATGAATACTTTAAGGAGCTTTCTGCAATCTCTTTTACCGTGTTCAAGCTTTTTTCTAGTTCGAGAATTCTATTCTGCTGGAATTCACCCATGGCTTTCCCCGCAACCATGCCCCGAAATTCGTCATCTAGAGGGAAACGATCAGGTTTGCTCTGGATATACTTCAGCAGCTCTCGTCCCACGAACCGAGAAGTCTCTTCGCTGGAGGGGCATCCTCCACGAACAGCACCCCAATCGATGAACGGGATACTCGTTTCAGTCTTTCGGTGAATCCATTTAAGCCCGATCATTGCCCTTGCCGCTGTCATGAAATCTGGTGCGAATGGTGTAAAAGTCACCCACTTACCCTCAACTTTGAGCGCACAGACCCAACCATTTCGAAGCACATACCAGTTTTCACGTGCCATCATGTCTCTAGCCAATTCAGTGGACACTCGTTCGTTGTCGCTCCTTGCCAATGATCCTTGCACTTTCCTCGGAAAGAGAGTCGCACTCACATTCAGGCCGTCAACAAACTGTTCAAAGTCGTCCGGCCTTTCGAAATTCAGAACCTCCCTGCGCAAACGCCAAAGTTGCCTGTACCTCTTCAGCTCCGGCAATGGTATATCCACGTTCATGAGAATCCGAAGCACATCATCACCAGTGAGCTTTGATCGTCCTGTAAAGATGCTCTTGGTTCTATCTTTGCTGAATCCCAGCTGCTTACCTACATCTTGCAGCTGCATGTGCTTTGCTTCCGCATAGTTCCTTAGCGAAGCCACCAACATTTTGCTATCGATCTCCATACTCACCTCGGCCGTATCTTTTTTCAAATTTTGTTATCCCAATGATATCAAGGTCTCAAGCCACATCAGGTGTAATTTCTGCACTCGAAATTCGTCAAACCGAACTGCATGTTTTTAGATGGAATCACCGACGAACACGAACGAAAGGAGGTGAGCAACATGGCAAACACCACGGACCCGATTTTGCACGTAGAAATCGTGCAGGGTGTGAGCAAGGCGGGTAAGCCATACGAGTGTCTCGAAGTTCTTCTTGGAGAGGACTCCGTTGGCCGTCTCTTCCCAACTCCACTGGAAATGCGCTCTATCAAAGCCGCTCTGCAAGATGAATCAGACATGACGTTCTGATTTCTCCTCAATGGCTGTCCCGAAGTGCCGGAGCGAACCTCAGCTTCGGCACTCCATCTTCACTGTTTTCACATTTGTCATATTCGAACCAGTCCAAGGAGAACCAATGGATTTCATCACCAAAGCGCAACTGTTCGCACAAGACCACTTCATCGTCATTGCAATCGTTCTCTTCGCCCTCCTCGCTGTGTGCGCGTTCTTCATCGCACGTCACAACAGCCGTGCAGCCCGCAAACATGACACACTGTGCGCAAAACCACTCAGCCTGTCGCCAGACGAGGAGAAAGCAGTGAAGGTGAGGTACGCGAGGAAGCCCAAGCGCGTGATTTTCTTGCTACCCGCCGCACTCACTACAGACGAAGACGTGAATGCATGGGCAGATGCGGTTGCCCCACGTCTCGGCCACGCATTCCAAGCAGTGAACGTGGAGACAATCCCACAGGGACTGTTCTCAAGAGCAAAATACAGGGTCACATTCGCCCGATTAGAGGAGCTTCGATGAATATCTTCAGAAACCATCGGAAACTGCCGTCAGACCGATATTCTCTCGGTCTTGACATCGCCGACCCGAAGAGGACAGTCACAATCCCGCGATCTGCACATCTTGCCGTCATCGGAGAGTCCAACAGCGGCAAAGGTAGCGTCATCGCCAACATCATCTCTCAGGAGGTGGCATTCGGCGGAGAAATTTGGTTCATCGATCTGAAAGCAGGCATGGAAGCAGAGAACTACTGTAACGTGCTGGCCCGTAAAGCCTACACCCTCGAAGAAGCATATGATCTGCTGACTGATTTCAACTCGAATGTGGACACACTAGCCGCCGAATGGCGCGGCAAGACGCGCTCCCTCACCGACGCCCAGACATGCCACCGACTGCTTGTCATCGATGAAGCGGCGGACATGGTTCGATCGGGCCCGAACAAAAAGCTATCAGACTCGTGCATCGAGTTGGTGCGATCGATTCTCTCACGATCCCGCGCTCTAAACTGCACGGTCGTGGTAGCTACCCAGAACCCGCGGGTAAGCACCAGCTTGCCATATCGGAGCTTGTTGCTCACTACCGTGGCACTTCGATTGAACTCTAAAGGCGAAGCCACCATGGCGTTGGGTGAAGATGCAGTGAAGCGTGGAGCCCGCCCATGGCAGATACCTTTTTCTCGACCTGGCGATGGGTATTTGTGGGATACCGAGACTAATCAGACGGTCTATCTGCATGTTCCATTCATCAGTGACGAGGAGCTGCACCGGCTGCATCGGTGACTCGGCTGGCGATGGGCGAAGCGTCAGCGAAAGCCCAGACCCAGCAGAGTCGCCGCCTGAAAGGTGTATGGGGGCCTACTACGACTGCCCCCATACGAGATGTGAGATGCGAGAAAGGCGAGAATATGACCGACGATAATACGCAAACCAGCCTGAACGACAAGGGTCGGTATTGGGCGGGCTTGATCTACCCCGACAGCTGTCCCGATGACTGGAAAGCAACCATGCAAATGTCGGGTTTGCAGATACTGGTTTCGCCAGTCCATGACAAGGACATCGAGGATCCTAAGACTGGGAAGTTGAAGAAACCACATAGGCACGTTGTCGCAATGTGGACGAACACGACGACACGTCGCAATGCGACACGTTTCTTCGAGCAGTTTAATGGGCCGAAAACCATACTGCGAGTGGAAAGTCCGCGCGGAATGGCTCGCTACTTGGTCCATCTCGATAACCCTGAAAAAGTTCAGTATCTGCCGGAAGATGTGATTGAGATCAATGGAGCCGATTGGAAGAAAATCGCGCTCACAGATGAGGAACGACCAGAAGTTATGGAACTTCTGGAACTCATTGAGGAGTGGGAGGTGCATGGCTACTTTGAGTTGCTCAAGCTCTGCGAGCTCAAGAAACCGAAGTTACTACCGGTCGCAGCCAAAGCGACAACCTATTGCCGTGAAGTCATCTGGTCATATTGGCAGTTCAAAGAACGGAACTCGAAGTTCAAAGACGAATTAATGGAACGTCAGCGTGAAGAACTGCGGAGGAAGAAAGCCACTGAGCAGACGAAGCAGCGTGCGCAGAGAAAGAAGCTCGATCAGAGCGCTCGCAAATCTCGGAAAAATCGTCGAGTAAAAAACCAACCGCAAAAAAGCGCCAAGAAGCAGAGGAGGAAGAACCATGGCCACCGTGCCTAGCAGCGAAACCCCGTCAGATCGACTGAAGTTCTACGATGTGAACGATCTACGGCAGATGTTCCATGTAGGACGCAATAAGGCTCGCCTAATGATGGACGCGCTTCCCTCGATTCGAGTCGGCAGCAAGGACTACGTGACAGAGAGCGCTCTAAACGCGCACATCGCAGAGCATGGAGGCATTCTCGTGAAGTGGCCTAAGCGCAATCGTTAGGCCACTCATAGCACGAGGCTTACTTGTTGCTCTTTTTGATGTTGTCCTTGACACAGAGCATCACACAATTTTCAAGAATCGTCTTGCCGCCCTTGCTCCATGGGATATTGTGATCTGCTTGCATCTCGGAGAGCTCGAAGTGTTGCTGGCACAACGGGCAAATGCCCTTTTGCTTTTCGTAGGCAGCACGCCTATCTCGATCGGTGAATGCGCGAATATTCAGGACGCGTTCATGGCCGGTCAGCAAGTACTCGTATACGCCAGACTTTCGAGTTACGTCGTCGTCTGCCATCAACTCACTCACTCGATCTTCAAGTGCCTTGGGGTCGTACTTCTGCTCATGATACTGGTTATACCAGAGACCCCACGGAAGCCCTTTCATCTCTCGCCGATATACGGGGAAGAGTGATTCCGTCCACTCGATTACCGTACGGAAATAACTCCACAGCTCCTGAGCAGTCGGGTCATTCTGGTGCGCCGACATGTATCCATCGACCGTAGTGCCGTCACGGTCTGCGATCCATTCGATTGCTGTCTCAAGGATCTCTTGTCGGATACTCTCGCCCTTGACGTAACCGTTACAACCCTTGCTGTTCCCATAACGGGCCGCTGGGCAGTTTGTCTTCGAAAAATAACGTTTTGCGTCCGATACCCACGGCCCTGCATACACAGCATTGCGGAGCTCTTGATTAGTGAGCCGTTCTCCTGCAATGTTGATGGTCTTGAACCACTTGAGTTTCTCAGAGTCCGTGCCATCACAGATGTAGACGAGAAGTTCGTAATCAAGAATCCTCTCCTGAACGTCTTCGGGAAGGTTATCGAAGTTCATAGCATTGTTCTCGTACTTGATTGAGAAATTGCCATCGACGTATTCCATCAGGCTTATGGTGCGCTGTTGGCCATCAAGAACTTCATACGTGTCATCGCCTGTTTTAGCCCAATACATCACATTGAGCGGGAGCCCCTGCAATACGGTATCAATCACGGCATCACGCTTCGCGTCCTTGTAAACGAATTCACGCTGATAGCGGGGACGAATATCCAAGCGATCGTCATAGCCGACCACACCCTCTTCATCATCGTTCTCATAGTTTTCATATACGTCGCGAACCTTGATGCGGTTTTCAGTGATCTGCATTACTTTCCTTGCGCTTCTTCGAGAGTGACTGTTTCATAGGGGCGAGGTTCGGGGTGCAAGTTGCGGACAAGTATCCGCCCGAATTTCAGCTTGCCGTTGATGTATGGGCCGTCCTTACCAGTAGAGGACGGAATGCCGGCTAATCCCCGGATATTGCCAGCAAGTAGCCCGATAATCTCGAACTGATCCGGATTGAACTTGTCCATGAATGTGACGGGTACACCCATGATTCCCTCATAATCACAAGGAATATCAATCACCTTACCGACATTGATGGCTTCGTAATTGTCATACTTTGGGTAATCGTCGCGATTGTAACGCTTAACCAGAACTAGGTCTTCATGGCGCTTCTTGATGTCGAGATTGGTGTACCAACAGGCATTTCCCATGGATCGCCACTTCTGCCCGCTCTCATCTTGCCAATATCGCGTTTTACGCGGCTCATAGTCATCTGGAACCTTAAACGCCATATCGCCACAACCATAGCCCAGCCAGACTTTGTTATCCCGCAATAGGGGGAAGAACTCCTTATAGGTGATAGCGTTTTGGTTACCGATGATGATGAATTTCTTATCATGCTCCACAAGGGTAGACACGAATTCACGGAATTTCGAGAAAGGCGGATTGGTCACCACGATGTCCGCTTCATCTAGCAATCTCAGGCATTCTTCTGATCTGAAATCGCCGTTGCCTTCTAGACGTTCGCAAAGGTTCTCGCCCTGCTTGAACAATTCGGCCACGTCAACCATGCTGGTAGCACCATCACCATTGGCATCACGCACAGAAGTCACAACAGCCTTGTAAGGCGTGCGCCTTTCCTCTTCTGTGTCGTCACCGAAAAGCGTGAGCTCGTTCCCTGTTATCGGGGATCCTGAATAGCAAGTTGCAATGAGCTTCTTCAACTTCAGACGATTGAAATTTAAGCAGAAATATTTGAAGAAATTAGATTCGAATGGATCATCACAATTGCACAACACCGTCTTGCCCGCAAAATGCTTCCGATAATGTTTCAACTCAGATTCGATGTCTGACAACTGAGTGTAGAACTCGTCTTCTTTCGCCTGATTTGCTCGATTGAGAGGCGTAGCCATGCCTGTATCACCACCATCCATTCATTCTGATCGATTAATTATATACACCCTAGATCTTCAGCACTACCGATAACCCACTATTCCAACAGCTTGCCCATAAAATCGGCAGCCTTACGATCATTCTCGCCCACTTCTTCGGCATAGATATTCAGCGTTGTGTTCAAGCTCTCGTGCCCCAAGCGCGCCTGCACAGTCTTGGGATCCACTCCCCCCGCCACCAGCAGCGTGGCTTGAGCTCTTCGCAATGCCTGAAAGTTCGGGCCGATGTATCCCGACCGCTTCACTCGTTCTATTCCGCGACGATCGATATAGGTTGATTCGTGCGCGTAATGTGCCAGTCCCTCTTCAACATAGAATTTCCTCCTCCATCTGCTGAAGTTGTCAGGATCGAGGAAAACGCACAGATCATTACTGCATACTGGCGAGGATTCCTGCAAAGTAAGCCCCACTTCTGCAAATAGCCCTGCTTGCTTGGTCTTCCACTTCGTAAGGAATTCTACAGTCTGGTTATCAATAGAAATCGTGCGGCGAGACTTTGCTGTCTTCGGGTCTTTAAGTACTTTCTCCTTGCCGTACTGTTTACGAATCCGGAGACGTGCGTTCTCTAAATCAACATCCTCCCAGACAAGCGCCAGCGCTTCGCCGCGCCTTAAGCCAGTTGCCAGACCAAGCCAGACTGCCACAATCCGACCGTCTTGCGGCTCATTCTTAAGCTTGTGCACGAACTCCAAGGCCTGTTCTTTTGTAATTCGCGTTTCTTTGCGTTTCTGCGGACTTACCTTTGGACGTTTGATATCCTCTACGGCATCGCATGGATTACGCTCAATCAGTTCCTCGAGGTAGGCTTTGCGCATGATCTGCGCCAACTTCATATGCACCTTATGAATCGCGTCAGGCGATGCGTTGTCTTGCTCTGCCATGTGCAAGTATGCTTTCTCTATACGCTGTGCATCTAGATCCACTACGCGAACATCACCGAGAAACTTCACGATGCGATCAATCTCGTGCTGATCTCGTTCGATAGTCAGCGAAGACACCTTTCCGAGAGCCCTCCTCTTAGCTTGGAAATCGGTTGCATACTCTCCGACAGTAACGCTCTTCCCACTACGAGCATCTTCTAGCTCCTGCCTGTAAGCCACGAGAGCTGCTGTGGCTTCTGCCTTGTTTCCCTGAACCTTGCGACTCTTTGACCAGTGCCACGATTGGTGAGTATCGTCCGGTGCAAGTCGCACACGAATCGAATACCGCCGACCGCGCTCCAACTCTTTGATCTCTCCCGATGTCTCTCGCTTCGCCATCTTTGACCTCCTTCGTATGTATCCAGTGTATCATTTCTGGACAATTCTGGACATGGATGCAGTTGGACAAAAGTTGGACAAAGTCACCAATCACCATTAACAGAAATCAATGAATTACGGCGTTTCTAGGTCATTGTCAAGACCTAGAATAAACAATACCAAACTCGGATAAACTGTAGAAACGTGGGCTCATAACCCAGAGGTCCATGGTTCAAATCCATGCCCCGCTACcactgagggctaggaatcgaattcctagcccttttgcttttccagcgcatgaaaccgactccgcgcaccaatcgaatctacgtcaccgtccacactcccc