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The tmRNA Website

The tmRNA Website

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Hodgkinia cicadicola TETUND1


Sequence

        10        20        30        40        50
.....GCTAACTTAGCTATGACAATAAACAAGTGGCAATGCAATAATCCGCTGGATCCGGGTTAAACTCCCGGCACCTCCAcaacaaaatagGGGGGTGATAAAGAAAGTAGACAGCGGTGTAAAGGTTCCCACGCTTGTCCGAAGCCTATGCGTTAATAGGAAAAATgtaagccaacacaatgagtttacacacgctgacgcgttagttccaagtagagctaacgatTAAGCGCGTGCTGCCGTAGATAGCGTTTGAGCTATTCGCAGTCAGCACAAGGGGTCAGGGGACGCCCGTCAACAGAAGTCCCCATT

Annotation


tmID: 19190
Length: 344 nts
Accession: CP007232.1/46688-46345
Proteolysis Tag: (A)VSQRNEFTHANALVPNRADD*
CCA: 78..81 (caa)
Acceptor piece: 1..77
IVS: 78..88
Coding piece: 89..310

SmpB Pseudogene

Predicted coordinates: CP007232.1/36477-36106
Pseudogene coordinates: CP007232.1/36477-36106

Translation:

IksqslclZailsqaqlecascpvgLaltgeqvnZletlnriptfgnelwVsgltrfkVkalltkaqlIdivsaMlvvknVLssgpalIkatIVahkpekrralseklalarqqaggafgInigZ



Abbreviated Taxonomy

Proteobacteria,Alpha: Hodgkinia: Hodgkinia cicadicola TETUND1


No identical tmRNA Sequences

 

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