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The tmRNA Website

The tmRNA Website

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Sandia Biology

Aggregatibacter actinomycetemcomitans ANH9381


Sequence

        10        20        30        40        50
.....GGGGCTGATTCTGGATTCGACGGGATTAGCGAAGCCCGAAGTGCACGTCGAGGTGCGGTAGGCCTCGTAAATAAACCGCAAAAAAATAGTCgcaaacgacgaacaatacgctttagcagctTAATAACCTGCCTTTAGCCTTCGCTCCCCAGCTTCCGCTCGTAAGACGGGGATAAAGCGGAGTCAAACCAAAACGAGCTCGTGTGGAAGCCACCGTTTGAGGATCGAAGCATTAAATTAAATCAAACTAGCTTAATTGTCGCGTGTCCGTCCGCAGGATTAAGTGAATTTAAAGACCGGACTAAACGTGTAGTGCTAACGGCAGAGGAATTTCGGACGGGGGTTCAACTCCCCCCAGCTCCAcca

Annotation


tmID: 19118
Length: 366 nts
Accession: CP003099.1/558773-559138
NC_016513.1/558773-559138
Proteolysis Tag: (A)ANDEQYALAA**
CCA: 364..366 (cca)

SmpB Pseudogene

Predicted coordinates: NC_016513.1/40809-40328
Pseudogene coordinates: NC_016513.1/40414-40328

Translation:

MtkkkvkpgsntIalnkrarhdyfIedeIeaglelqgweVksMragkvnLsdsyVIfkngeaflfgatIqplsVasthIVcdptrtrklLlkqreldslfgkanrdgftlIalslswkgawakvkIgLakgkkqqdkredIkerewkVvkerIMknarkgZ



Abbreviated Taxonomy

Proteobacteria,Gamma: Aggregatibacter: Aggregatibacter actinomycetemcomitans ANH9381


Identical tmRNA Sequences

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