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The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


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Sandia Biology

Streptomyces venezuelae ATCC 10712


Sequence

        10        20        30        40        50
.....GGGGATGATCGGTTTCGACAGCGGATACCGATGCAGAGGAAGCGTGTCGAGGAAGCGGCAATGATCTCGTAAACCATATGTCGCAACCAATAATCgccaactccaagagcgataactcccgcttcgccctcgctgccTAATTTTAGGTAACGACAAGAAGCCTCTGTGAGGAGCGTCAGCCCGGGGGTGGTCCCGACCCGGATCCTGGCGTCATCAAGGGATCTAAACCTCTAGCCCCGGTCACGGGGGTTGGAGGGAAATCAAACAGTGACTGAGCCCGTCGGAGACTTGTCCGCGTGATCTCCGGGGCTGAGAAACTCGTAGCGGACTGCACACGGAGAAGCTCTGCTTCCGTACCGTTGGACGCGGGTTCGATTCCCGCCATCTCCAccg

Annotation


tmID: 17698
Length: 393 nts
Accession: FR845719.1/2968892-2968500
NC_018750.1/2968892-2968500
Proteolysis Tag: (A)ANSKSDNSRFALAA*
CCA: 391..393 (ccg)

SmpB

Coordinates: NC_018750.1/2969532-2968993
Cooriented, 101bp upstream of tmRNA

Translation:

MakglVnVqgkpakknqdkaperkMiaqnkkarhdyhiidtyecgVVlMgteVkslrMgraslvdgfVqidnheawlhsihVpeyMqgswtnhsakrkrklllhreeidkleaksqetghtiVplalyflngrvkveialakgkkefdkrqtlrekqdtretnraiaaakrrqraaqagZ



Abbreviated Taxonomy

Actinobacteria: Streptomyces: Streptomyces venezuelae ATCC 10712


No identical tmRNA Sequences

 

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