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The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


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Sandia Biology

Pectobacterium carotovorum subsp. carotovorum PCC21


Sequence

        10        20        30        40        50
.....GGGGCTGATTCTGGATTCGACGGGATTTGCAAAGCCCAAGGTGCATGCCGAGGGGCGGTTTGCCTCGTAAAAAGCCGCAAAAAAATAGTCgcaaacgacgaaacctacgctttagcagctTAATAACCTGCTTTTAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGTGTGGATGCCTTGCCTGGGGTTGAAGCACTAAATCTAATCAGGCTAGTTTGTTAGTGGCGTGTCTATTCGCAGCTGGCAAGCGAATGTAAAGATAGACTAAGCATGTAGTACCGACGGTAGAGTGGTTCCGGACGGGGGTTCAAATCCCCCCAGCTCCAcca

Annotation


tmID: 16329
Length: 363 nts
Accession: CP003776.1/844950-844588
NC_018525.1/844950-844588
Proteolysis Tag: (A)ANDETYALAA**
CCA: 361..363 (cca)

SmpB Pseudogene

Predicted coordinates: NC_018525.1/845484-845001
Pseudogene coordinates: NC_018525.1/845474-845001
Cooriented, 51bp upstream of tmRNA

Translation:

MtkkkaykpgsatIaqnkrarheyfIeeefeaglalqgwevkslragkanlsdsyvtfMngeaylfgatitplnVasshvVcdptrtrklllnkreldslfgrvsrdgytvvalsMywknawskvkigVakgkkdhdkrddikerewkldkariMknanrZ



Abbreviated Taxonomy

Proteobacteria,Gamma: Pectobacterium: Pectobacterium carotovorum subsp. carotovorum PCC21


Identical tmRNA Sequences

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