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The tmRNA Website

The tmRNA Website

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Mycobacterium abscessus


Sequence

        10        20        30        40        50
.....GGGGCTGAACGGTTTCGACAGCGAGTCTCGACTTAAGGGAAGCGTGCCGGTGCAGGCAAGAGACCACCGTAAGCGTCATTGCAACCAATTAAGCgccgattctcatcagcgcgactacgcactcgctgccTAAGCGACTGCGTGTCTGTCAGACCGGGACCTCCCGCGGCCCGGACCCTGGCATCAGCTAGCGGGATCAACCGGTGGCTTCGGCCGCGGAGGCCACCGGGACATCAAACAGCGGCTGGGATCGTCATCTCGGCTTGTTCGCGGGACCGAGAGATCCAAGTAGAGGCATAGCGAACTGCGCACGGAGAAGCCTTAATGAAGGGCCGTTGGACCCGGGTTCAATTCCCGGCAGCTCCAcaa

Annotation


tmID: 16003
Length: 369 nts
Accession: CU458896.1/3513772-3513404
NC_010397.1/3513772-3513404
Proteolysis Tag: (A)ADSHQRDYALAA*
CCA: 367..369 (caa)
Links to additional tmRNA in the same genome
/1-306

SmpB

Coordinates: NC_010397.1/3515030-3514551
Cooriented, 779bp upstream of tmRNA

Translation:

MskkpadgrkviatnrkarhnysiidVyeagVqLVgtevktlregkaslvdafatvddgeVwLrgVhipqydhgtwtnhaplrnrklLLhraqidMlvgktrdgnltlvplslyfldgkvkVeLalargkqahdkrqdiakrdasreitrelgrrakgMZ



Abbreviated Taxonomy

Actinobacteria: Mycobacterium: Mycobacterium abscessus


Identical tmRNA Sequences

Mycobacterium abscessus
DQ480289.1/1-306
Mycobacterium abscessus 3A-0119-R
NZ_AKUX01000011.1/341152-341520
Mycobacterium abscessus 3A-0122-R
NZ_AKUY01000030.1/58666-59034
Mycobacterium abscessus 3A-0122-S
NZ_AKUZ01000016.1/341155-341523
Mycobacterium abscessus 3A-0731
NZ_AKVA01000010.1/503274-503642
Mycobacterium abscessus 3A-0810-R
NZ_AKUP01000019.1/509470-509838
Mycobacterium abscessus 3A-0930-R
NZ_AKVB01000010.1/341199-341567
Mycobacterium abscessus 3A-0930-S
NZ_AKVC01000009.1/254688-255056
Mycobacterium abscessus 47J26
NZ_AGQU01000001.1/401019-401387
Mycobacterium abscessus 6G-0125-R
NZ_AKUE01000005.1/1020000-1020368
Mycobacterium abscessus 6G-0125-S
NZ_AKUF01000008.1/341187-341555
Mycobacterium abscessus 6G-0212
NZ_AKUR01000012.1/341169-341537
Mycobacterium abscessus 6G-0728-R
NZ_AKUS01000008.1/611232-611600
Mycobacterium abscessus 6G-0728-S
NZ_AKUG01000006.1/341172-341540
Mycobacterium abscessus 6G-1108
NZ_AKUH01000015.1/261895-262263
Mycobacterium abscessus CF
NZ_HE817967.1/3521812-3522180
Mycobacterium abscessus M148
NZ_AKVV01000055.1/4091-4459
Mycobacterium abscessus M152
NZ_AKVT01000024.1/55930-56298
Mycobacterium abscessus M154
NZ_AJMA01000005.1/255415-255783
Mycobacterium abscessus M156
NZ_AKVU01000002.1/295101-295469
Mycobacterium abscessus M159
NZ_AJSD01000033.1/183624-183992
Mycobacterium abscessus M172
NZ_AJSE01000002.1/823591-823959
Mycobacterium abscessus M94
NZ_AJGG01000037.1/71753-72121
Mycobacterium abscessus subsp. bolletii 50594
CP004374.1/3508472-3508840
NC_021282.1/3508472-3508840
Mycobacterium abscessus subsp. bolletii CRM-0020
NZ_ATFQ01000026.1/52543-52911
Mycobacterium massiliense 1S-151-0930
NZ_AKUI01000003.1/1620634-1621002
Mycobacterium massiliense 1S-152-0914
NZ_AKUJ01000002.1/2881297-2881665
Mycobacterium massiliense 1S-153-0915
NZ_AKUK01000012.1/428005-428373
Mycobacterium massiliense 1S-154-0310
NZ_AKUL01000004.1/1343378-1343746
Mycobacterium massiliense 2B-0107
NZ_AKUN01000006.1/248820-249188
Mycobacterium massiliense 2B-0307
NZ_AKUU01000008.1/362763-363131
Mycobacterium massiliense 2B-0626
NZ_AKUM01000006.1/248807-249175
Mycobacterium massiliense 2B-0912-R
NZ_AKUV01000009.1/248793-249161
Mycobacterium massiliense 2B-0912-S
NZ_AKUW01000012.1/248788-249156
Mycobacterium massiliense 2B-1231
NZ_AKUO01000009.1/362753-363121
Mycobacterium massiliense M18
NZ_AJSC01000003.1/822835-823203
Mycobacterium massiliense str. GO 06
CP003699.1/3514494-3514862
NC_018150.1/3514494-3514862

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