skip to: onlinetools | mainnavigation | content | footer

The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


Page Contact
Kelly Williams

(925) 294-4730


Corey Hudson

(925) 294-1575


Related Links
Sandia Biology

Streptomyces coelicolor A3(2)


Sequence

        10        20        30        40        50
.....GGGGATGATCGGTTTCGACAGCGGCTGTCGAAGCAGGGGAAGCGTGTCGAGGAAGCGGCCATGATCTCGTAAACCACAGGCCGAAAAAATAATCgccaacaccaagcgcgattcctcccagcaggccttcgccctcgctgccTGATCTCAGGTAGCGAAGCGAGCCTCCTACTAAGGGAGTGTCAGCCCGGGGCTGTTCCCGACCCGGATCCTGGCATCAGCTAGGGGACTAAACCTTGATCCCGGTCACGGGGTGAAGAGGGAAACCAAACAGTGACTGGGCCCGTCGGAGACTTGTCCGCGTGATCTCCGGGGCCGAGAAAATCGAAGCGGACTGCACACGGAGAAGCCCTGATTCCGCACCGTTGGACGCGGGTTCGATTCCCGCCATCTCCAcga

Annotation


tmID: 15044
Length: 399 nts
Accession: NC_003888.3/3226936-3226538
Proteolysis Tag: (A)ANTKRDSSQQAFALAA*
CCA: 397..399 (cga)

SmpB

Coordinates: NC_003888.3/3227529-3227050
Cooriented, 114bp upstream of tmRNA

Translation:

MakekgrkliaqnkkarhdyqildtyeaglVlsgteVkslrqgrasladgfVqldgheawlhnVhVpeysqgtwtnhsarrkrklllhrVeidklesksqetghtiVplalyfkdgrakveialargkkeydkrqtlrekqdrreaertisaikrkqraZ



Abbreviated Taxonomy

Actinobacteria: Streptomyces: Streptomyces coelicolor A3(2)


Identical tmRNA Sequences

Bioinformatics web site contact: