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The tmRNA Website

The tmRNA Website

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Streptomyces hygroscopicus subsp. jinggangensis 5008


Sequence

        10        20        30        40        50
.....GGGGATGATCGGTTTCGACAGCGGCTGTCGAAGCAGGGGAAGCGTGTCGAGGAAGCGGCAATGATCTCGTAAACCATATGTCGCAAAAAATAATCgccaacaccaagcgcgattccttcgccctcgctgccTAAGTAGCGACTTGCGAAGTGTCAGCCCGGGGCTGTTCCCGACCCGGATCCTGGCATCAGCTAGGGAACTAAACCTCTAGACCCGGTCACGGGGTGTAGAGGGAAATCAAACAGTGACTGAGCCCGTCGGAGACTTGTCCGCGTGATCTCCGGGGCCGAGAAACTCGCAGCGGACTGCACACGGAGAAGCCCTGATTCCGCACCGTTGGACGCGGGTTCGATTCCCGCCATCTCCAcga

Annotation


tmID: 14166
Length: 370 nts
Accession: CP003275.1/5098400-5098031
NC_017765.1/5098400-5098031
Proteolysis Tag: (A)ANTKRDSFALAA*
CCA: 368..370 (cga)

SmpB

Coordinates: NC_017765.1/5099065-5098523
Cooriented, 123bp upstream of tmRNA

Translation:

MyvpkesqpkqgggaakardgekggkrkivaqnkkarhdyaiidtyeaglVlMgtevkslregrtsltdgfvhidrgeawlhnahipeyhqgswtnhsarrkrklllhreeiakleskaqetghtiVplaiyfkdgrakaeialargkkeydkrqtlreqqdrreadraiaaakrrqrghZ



Abbreviated Taxonomy

Actinobacteria: Streptomyces: Streptomyces hygroscopicus subsp. jinggangensis 5008


Identical tmRNA Sequences

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