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The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


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Sandia Biology

Propionibacterium propionicum F0230a


Sequence

        10        20        30        40        50
.....GGGGATGACTGGTTTCGACTTGGACGGTAGTTCGAGGAGAAGCGGGCCGAGGATCCATGCTTGTCTCGTTAACGCTGCATGGGAACCAATAAGTgccaacaacagccgcactgacttcgctctcgctgccTGATCAGCGATCGAAGGGTCACGCCCGGGGGTGCCTTCCTCCTGGTGCCTGGCCTCATTCTTGAAGGCTTGCTGAACCGCCTGTGTTCCAGGGGTGGTTCGGGACTCAACTGGAACTGGGCCCGGCTGCGACTTGCTGACGTGAGCGCAGGGGCCGAGCAGACCGCCTAGTCAGCTGCGCCCGGAGAATCCCTGGTTCGCCTTTCAAGGACGCGGGTTCAATTCCCGCCATCTCCActg

Annotation


tmID: 13560
Length: 369 nts
Accession: CP002734.1/1635588-1635956
NC_018142.1/1635588-1635956
Proteolysis Tag: (A)ANNSRTDFALAA*
CCA: 367..369 (cug)

SmpB

Coordinates: NC_018142.1/1634416-1634901
Cooriented, 687bp upstream of tmRNA

Translation:

MpretgrtlvaqnkkarhdyqigetyeaglVltgtevktlrMgrvsLaeafatVddgevwlrnvnIpeyefgtwrnhaakrsrklllnrkeitrlaketeatgrtivplsIyfkdgyakVeiavatgkrdwdkrrsiaerdanreaqralrarnrlgsgrrZ



Abbreviated Taxonomy

Actinobacteria: Propionibacterium: Propionibacterium propionicum F0230a


No identical tmRNA Sequences

 

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