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The tmRNA Website

The tmRNA Website

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Sandia Biology

Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)


Sequence

        10        20        30        40        50
.....GGGGCTGTTTTTGGATTTGACAAAATTATCAACAAAGTAAAGTGCATGCCGAGGAACGGTTTGCCTCGATAAAAGCCGTAAAAAAATAATTgcaaataataaacaaaactacgctttagcagctTAAAAAACTGAATAAAGCCCTTCCTTCTTATCCTCCTTCTCTTAGGATGAGAAAACAGGAAGGTCAGAAAAAGAGAAAAACGTGGATATCAAGCTTGACGATAACACGAAGTAGTTTTTTCAAGCTATATACCTAATATGTGTTTTTCCAAATTAGGTAATGAATTCAATAAAGAAAAAACTAAGCATGTAGGGCTTTATTAGTAGAAATTTTGGACGCGGGTTCGAATCCCGCCAGCTCCAaaa

Annotation


tmID: 12194
Length: 369 nts
Accession: CP002301.1/202982-202614
NC_017252.1/202982-202614
Proteolysis Tag: (A)ANNKQNYALAA*
CCA: 367..369 (aaa)

SmpB Pseudogene

Predicted coordinates: NC_017252.1/281498-281985
Pseudogene coordinates: NC_017252.1/281509-281985

Translation:

MLqkkkyqkksskIiInkkayynyfiekvfqsglvlegweiksIrsgkvnIsesyiindrneMylcnclIepLqMssnrfscdptrkkkllLhkneIdflslkkkntgytMvslslfwkkswcklefglakgktaqdkrinlkkreweqeklkilkktketyZ



Abbreviated Taxonomy

Proteobacteria,Gamma: Buchnera: Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)


Identical tmRNA Sequences

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