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The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


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Sandia Biology

Xylanimonas cellulosilytica DSM 15894


Sequence

        10        20        30        40        50
.....GGGGCTGATCGGTTTCGACGGTGGTCGTGCTTCGAGGAGAAGCGGGCCGAGGATGCAGGCTCATCTCGTCAACGATGCCTGCACACACATAGTTgccgataacacgcgcaacgacttcgccctcgccgccTGAGCGAGCCCCGAAGTCCGTGAGCCCGGGATCGCTCTCGACCCGGTAGTTCGCGTCATCTAGAGAGCTCAGCCGCTGACCTGGGTCGCTTAGGTCAGTGGGACACCCAAGGCGACTGAGCCCGTCCGCGAATGAGTCTGCGCAAGCGCGGGGGCCGAGAAAATCCATAGCAGACTGCGCCCGGAGAAGTCCTGGAAAAGCGTCACCGGACCAGGGTTCGATTCCCTGCAGCTCCAcca

Annotation


tmID: 11242
Length: 369 nts
Accession: CP001821.1/1114631-1114999
NC_013530.1/1114631-1114999
Proteolysis Tag: (A)ADNTRNDFALAA*
CCA: 367..369 (cca)

SmpB

Coordinates: NC_013530.1/1114036-1114569
Cooriented, 62bp upstream of tmRNA

Translation:

VakgapkqVaeawakpkakaadkgpVrtVVannkkarhdyViedVleagiVlsgteVkalrMgraslvdgfVlidrgeawlegVhipeyfqgtwnnhaprrkrklllhkdeiVrlshkVqekghtiVplslyfldgrakVeialargkkeydkrqtlreqqdkreaqraMrqrelltZ



Abbreviated Taxonomy

Actinobacteria: Xylanimonas: Xylanimonas cellulosilytica DSM 15894


No identical tmRNA Sequences

 

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