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The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


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Streptomyces avermitilis MA-4680


Sequence

        10        20        30        40        50
.....GGGGATGATCGGTTTCGACAGCGGCTGTTGAAGCAGGGGAAGCGTGTCGAGGAAGCGGCAATGATCTCGTAAACCATATGTCGCAAAAAATAATCgccaataccaagagcgattcccagtccttcgccctcgctgccTAATAAGCAGTGAGTGAGGGACCCTTAATGGGTGTCAGCCCGGGAGTGTTCCCGACCCGGACCCTGGCATAATCTAGGGGACTAAACCATCGAGCCCGGTCACGGGGTTCGATGGGAAATCAAACAGTGACTGGGCCCGTCGGCGACTTGTTCGCGTGATCGCCGGGGCCGAGAAAATCGCAGCGAACTGCACACGGAGAAGCCCTGATTCTGCACCGGTGGACGCGGGTTCGATTCCCGCCATCTCCAcga

Annotation


tmID: 11114
Length: 389 nts
Accession: BA000030.3/6202757-6203145
NC_003155.4/6202757-6203145
Proteolysis Tag: (A)ANTKSDSQSFALAA**
CCA: 387..389 (cga)

SmpB

Coordinates: NC_003155.4/6202121-6202654
Cooriented, 103bp upstream of tmRNA

Translation:

MyvpkesqpkqgggasgkvkdgkrkivaqnkkarhdyaiidtyeaglVltgteVkslrqgrasltdgfvqidgneawlhnahipeysqgtwtnhtVrrkrklllhreeidklaskseetghtiVplalyfkdgrakaeialargkkeydkrqtlrekqdrresdraiaaakrkqrgeZ



Abbreviated Taxonomy

Actinobacteria: Streptomyces: Streptomyces avermitilis MA-4680


Identical tmRNA Sequences

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