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The tmRNA Website

The tmRNA Website

Image Title The tmRNA Website.


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Sandia Biology

Streptomyces scabiei 87.22


Sequence

        10        20        30        40        50
.....GGGGATGATCGGTTTCGACAGCGGATGTCGAGGCAGGGGAAGCGTGTCGAGGAAGCGGCCACGATCTCGTTAACCACAGGCCGAAAAAAATAATCgccaattccaagagcgattctccgcagcagcagttctccctcgccgccTGATCTCAGGTAGCGACGAGACTGCTCCTGCACTAAGGAGTGTCAGCCCGGGGCTGTTCCCGACCCGGATCCTGGCATCAGCTAGGGGACTAAACCTTGATCCCGGTCACGGGGTGAAGAGGGAAATCTAACAGTGACTGGGCCCGTCGGCGACTTGTTCGCGTGATCGCCGGGGCCGAGAAAATCACAGCGAACTGCACACGGAGAAGCCCTGGTTCCACACCGTTGGACGCGGGTTCGATTCCCGCCATCTCCAcaa

Annotation


tmID: 10603
Length: 402 nts
Accession: FN554889.1/6220307-6220708
NC_013929.1/6220307-6220708
Proteolysis Tag: (A)ANSKSDSPQQQFSLAA*
CCA: 400..402 (caa)

SmpB

Coordinates: NC_013929.1/6219644-6220186
Cooriented, 121bp upstream of tmRNA

Translation:

MyvpkesqpkqggaatkgrdgekggkkkivaqnkkarhdyaiidtyeaglvlMgtevkslregrtsladgfvqidrgeawlhnahipeyhqgswtnhsarrkrklllhreeidkleskaqetghtiVplalyfkdgrakaeialargkkeydkrqtlreqqdrresdraiaaakrkqreaZ



Abbreviated Taxonomy

Actinobacteria: Streptomyces: Streptomyces scabiei 87.22


No identical tmRNA Sequences

 

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