tRNA/fragment and flanking sequence:

tRNA
2811443 gcccgaatta aacaattgtt ttataggctg tgttatactc cgcgacgctg tGCGGCCATC
2811503 GTATAATGGT ATTACCTCAG CTTCCCAAGC TGATGACGCG GGTTCGATTC CCGCTGGCCG
2811563 CTCCAacacc gctcaatatc gtggcatatt ttgttcagct ttggctggcc gcgtag

tDNA Fragment
3003723 acgtagcgac aatcaccagg ttcatattgt ctttgtagtc gactttcgcc aGGGTaCGAa
3003783 TgCCGCTGGC CGCcacggtg ccaaacagca ccaccccggc accgccgagc accggcatcg
3003843 ggat

tRNA gene (GREEN CAPS): 2811494..2811567
Displaced gene fragment (GREEN, mismatches lowercase): 3003774..3003795
Match (underlined) extends 3-prime beyond tDNA: 0 bp
Index point: nt 64
Mismatches: 4,8,10
Damage within repeat (Red): none
Junction: T-stem junction site
Supplemental Island Information
Island Length: 192232 bp
Mononucleotide (difference to replicon): 1.07
Dinucleotide bias (between genome and island): 0.01
Minimum distance between integrase and endpoint: 3.98
Density of hypothetical proteins (fold over replicon): 0.04
Housekeeping index: 0.41

Potential integrases in NC_012214
8728388347
548727549689
557370558347
937492938589
16702821671655
23238122324984
28210362821452Integrase in the opposite orientation as tDNA
28213002822034Integrase in the same orientation as tDNA
33005263301503
38579343858647

Potential fragments for tRNA-Gly(CCC)
116412116400
654987654975
716448716436
24931992493182
30037953003774
36756533675638